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Biotechnology Information microbial genome database
Microbial Genome Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microbial+genome+database/data+genome+sequencing+whole/pmc13006357-91-7-16
Average 86 stars, based on 1 article reviews
microbial genome database - by Bioz Stars, 2026-10
86/100 stars

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Construct:

Article Title: Combination of metagenomic next-generation sequencing and conventional tests unraveled pathogen profiles in infected patients undergoing allogeneic hematopoietic stem cell transplantation in Jilin Province of China
Article Snippet: .. And then, the clean reads were blasted against a microbial genome database constructed according to the published microbial genome databases, including reference sequence database at National Center for Biotechnology Information. ..

Sequencing:

Article Title: Combination of metagenomic next-generation sequencing and conventional tests unraveled pathogen profiles in infected patients undergoing allogeneic hematopoietic stem cell transplantation in Jilin Province of China
Article Snippet: .. And then, the clean reads were blasted against a microbial genome database constructed according to the published microbial genome databases, including reference sequence database at National Center for Biotechnology Information. ..

Article Title: Immuno-diagnosis of Mycobacterium tuberculosis in sputum, and reduction of timelines for its positive cultures to within 3 h by pathogen-specific thymidylate kinase expression assays
Article Snippet: .. Specifically, potential for cross-reactivity with TMK of other bacteria species other than TMKmt as predicted by basic local sequence alignments tool (BLAST) analysis across the National Center for Biotechnology Information (NCBI) microbial genome database. ..

Article Title: Identification and evaluation of potential bio-control fungal endophytes against Ustilagonoidea virens on rice plants.
Article Snippet: Interest in utilizing non-pathogenic endophytes in the search of biological control agents as well as plant growth promoters is increasing since these microorganisms are well adapted to their host and are able to colonize an ecological niche similar to that of the phytopathogens (Berg et al. 2005).. In addition, they are also considered as good producers of secondary metabolites that are required for their survival in the face of host defense responses due to the antifungal and antibacterial activity which is capable to inhibit the growth of other microorganisms (Berg 2009; Brader et al. 2014).. Non-pathogenic endophytes are also able to speed-up nitrogen fixing capabilities of host plants (Rahman and Saiga 2005).

Bacteria:

Article Title: Immuno-diagnosis of Mycobacterium tuberculosis in sputum, and reduction of timelines for its positive cultures to within 3 h by pathogen-specific thymidylate kinase expression assays
Article Snippet: .. Specifically, potential for cross-reactivity with TMK of other bacteria species other than TMKmt as predicted by basic local sequence alignments tool (BLAST) analysis across the National Center for Biotechnology Information (NCBI) microbial genome database. ..

Article Title: Performance of Metagenomic Next-Generation Sequencing for the Diagnosis of Cryptococcal Meningitis in HIV-Negative Patients
Article Snippet: .. Finally, to get the microbial compositions of the sample, the remaining data were aligned to the microbial genome database built locally, downloaded from the National Center for Biotechnology Information ( ftp://ftp.ncbi.nlm.nih.gov/genomes/ ), containing genomes of tens of thousands of known microorganisms such as bacteria, archaea, mycoplasma, chlamydia, rickettsia, spirochetes, viruses, and fungi. ..

Article Title: Performance of Metagenomic Next-Generation Sequencing for the Diagnosis of Cryptococcal Meningitis in HIV-Negative Patients.
Article Snippet: .. Finally, to get the microbial compositions of the sample, the remaining data were aligned to the microbial genome database built locally, downloaded from the National Center for Biotechnology Information April 2022 | Volume 12 | Article 831959 (ftp://ftp.ncbi.nlm.nih.gov/genomes/), containing genomes of tens of thousands of known microorganisms such as bacteria, archaea, mycoplasma, chlamydia, rickettsia, spirochetes, viruses, and fungi. ..



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